Thermal unfolding data is an easy way to create a “fingerprint” of your protein. By keeping the same ramp rate, you can compare how the unfolding of a single protein changes in response to altering buffer salts, pH, or protein residues. You can also use this fingerprint to compare the differences between two proteins or compare purity in different batches of preparations – variations in the comparison can tell you whether your protein is stabilized or destabilized in response to particular environmental changes.
When looking at large data sets, it is not easy to go through each individual unfolding curve looking for variations. Thus, researchers need parameters that can act as a quick measure of how protein stability has been altered. No parameter is more important for this ranking than the Tm and the melting onset. PR.Stability Analysis software offers quick automated determination of these parameters—but what if you want to confirm the reliability of this data? The software also makes it easy to check these automatically determined values and add or remove markers to improve data analysis. Let’s begin the next installment of Applications Academy: Defining markers in PR.Stability Analysis.
PR.Stability analysis does an exemplary job determining the melting onsets and inflection points (IPs) using its automatic algorithms. However, data can have errors in it—a capillary may contain a bubble, Region of Interest analysis might determine a subtle Tm not caught by the broad analysis, or you may want to disregard an inflection you know is wrong. Being able to add and remove your own markers is important for in-depth data analysis, as it gives you control over data interpretation.
NanoTemper’s PR.Stability Analysis software was developed with researchers in mind to help them get meaningful results and conclusions faster. Join the Explorer Community today to get even more out of your Prometheus. Here you can chat with the many users across the globe who use Prometheus to get advanced biophysical information about their proteins and formulations! Plus, find protocols, answers to frequently asked questions, or connect with NanoTemper’s team of applications specialists to get the most out of your Prometheus experience. And stay tuned for upcoming installments in our Applications Academy tutorial series.